We would like to present an automated pipeline, AUGUR, which integrates multiple computational tools for surface protein prediction
and functional classification of proteins from gram-positive bacteria.

Augur consists of tools for identifying all major surface proteins, through signal peptide prediction, transmembrane protein prediction
and all types of surface anchors e.g. lipoproteins or LPXTG proteins. It also annotates the genome using the SCOP protein
structural database, and the COG functional classification.